Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115151643Receptor expression-enhancing protein 6-like. (228 aa)    
Predicted Functional Partners:
LOC115176562
Prenylated Rab acceptor protein 1-like.
   
 
 0.774
LOC115177269
Prenylated Rab acceptor protein 1-like.
   
 
 0.774
reep5
Receptor accessory protein 5.
    
 
 0.741
LOC115179614
Receptor expression-enhancing protein 6-like.
    
 
 0.741
LOC115196195
Receptor expression-enhancing protein 6-like.
    
 
 0.741
LOC115162194
Uncharacterized protein FAM241A-like.
    
   0.700
LOC115172475
Uncharacterized protein FAM241A-like.
    
   0.700
LOC115181502
ADP-ribosylation factor-like protein 6-interacting protein 1.
    
 
 0.671
ENSSTUP00000082560
Ribosomal protein S15a.
    
 
 0.671
LOC115181502-2
ADP-ribosylation factor-like protein 6-interacting protein 1.
    
 
 0.671
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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