Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115150672Sortilin-like. (814 aa)    
Predicted Functional Partners:
ENSSTUP00000000880
annotation not available
    
 0.980
ENSSTUP00000026568
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.980
ENSSTUP00000052771
annotation not available
    
 
 0.912
ENSSTUP00000110380
Neurotensin.
    
 
 0.912
LOC115167112
Brain-derived neurotrophic factor-like.
    
 
 0.903
ENSSTUP00000068744
Brain-derived neurotrophic factor.
    
 
 0.903
ENSSTUP00000012162
Sortilin-related VPS10 domain containing receptor 2.
    
 0.882
ENSSTUP00000043238
annotation not available
    
 0.882
ENSSTUP00000043274
Sortilin related VPS10 domain containing receptor 3b.
    
 0.882
LOC115147218
VPS10 domain-containing receptor SorCS1-like.
    
 0.882
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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