Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC1151973211-aminocyclopropane-1-carboxylate synthase-like protein 1. (987 aa)    
Predicted Functional Partners:
LOC115205223
Malate synthase-like.
    
 0.948
LOC115192728
Alpha-aminoadipic semialdehyde synthase, mitochondrial-like.
    
 0.925
AMD1
Adenosylmethionine decarboxylase 1.
     
 0.912
LOC115194087
S-adenosylmethionine decarboxylase proenzyme-like.
     
 0.912
srm
Spermidine synthase.
   
 0.891
mat2b
Methionine adenosyltransferase 2B.
    
 0.862
trdmt1
tRNA aspartic acid methyltransferase 1.
    
  0.858
LOC115158965
S-adenosylmethionine synthase-like.
  
 0.843
LOC115159444
S-adenosylmethionine synthase-like.
  
 0.843
LOC115204189
S-adenosylmethionine synthase-like.
  
 0.843
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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