Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115203911Stanniocalcin-like. (255 aa)    
Predicted Functional Partners:
HBE1
Hemoglobin subunit beta.
  
   
 0.592
LOC115171225
Hemoglobin subunit beta-like.
  
   
 0.592
ENSSTUP00000003459
annotation not available
  
   
 0.588
ENSSTUP00000079778
Purinergic receptor P2X, ligand-gated ion channel, 3b.
      
 0.522
ENSSTUP00000100553
Purinergic receptor P2X, ligand-gated ion channel, 3b.
      
 0.522
LOC115167395
Cadherin-16-like.
      
 0.490
ENSSTUP00000034367
annotation not available
      
 0.441
LOC115208134
Parathyroid hormone 4-like.
      
 0.441
LOC115152922
Parvalbumin-2-like.
  
   
 0.433
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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