Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115198061L-rhamnose-binding lectin CSL1. (328 aa)    
Predicted Functional Partners:
GNB5
Guanine nucleotide-binding protein subunit beta-5a-like.
    
  0.952
LOC115168183
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like.
    
  0.952
LOC115176477
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like.
    
  0.952
LOC115166976
Guanine nucleotide-binding protein subunit beta-5b.
    
  0.952
GNB4
Guanine nucleotide-binding protein subunit beta-4.
    
  0.952
LOC115154423
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2.
    
  0.952
LOC115192893
Guanine nucleotide-binding protein subunit beta-5a.
    
  0.952
ENSSTUP00000054763
Guanine nucleotide binding protein (G protein), beta polypeptide 3b.
    
  0.952
LOC115175948
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like.
    
  0.952
LOC115207476
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like.
    
  0.952
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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