Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115154265BTB/POZ domain-containing protein KCTD7. (506 aa)    
Predicted Functional Partners:
LOC115205866
Cullin-3-like.
    
 0.931
CUL3
Cullin-3-like.
    
 0.931
LOC115157472
Cullin-3-like.
    
 0.931
LOC115162911
Cullin-3.
    
 0.931
RBX1
Ring-box 1.
    
  0.831
ENSSTUP00000068028
annotation not available
    
  0.831
LOC115171287
RING-box protein 1.
    
  0.831
SHKBP1
SH3KBP1-binding protein 1-like.
    
 
 0.757
SHKBP1-2
SH3KBP1-binding protein 1-like.
    
 
 0.757
LOC115162505
BTB/POZ domain-containing protein KCTD3-like.
    
 
 0.757
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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