Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115198790Metallophosphoesterase domain-containing protein 1-like. (310 aa)    
Predicted Functional Partners:
LOC115201114
MMS19 nucleotide excision repair protein homolog.
    
   0.678
LOC115157635
MMS19 nucleotide excision repair protein homolog.
    
   0.678
txndc9
Thioredoxin domain containing 9.
    
   0.674
LOC115161255
Thioredoxin domain-containing protein 9-like.
    
   0.674
LOC115154443
Uracil phosphoribosyltransferase homolog.
    
   0.673
LOC115188241
Uracil phosphoribosyltransferase homolog.
    
   0.673
ENSSTUP00000104398
annotation not available
    
   0.673
LOC115200070
Probable cytosolic iron-sulfur protein assembly protein ciao1-A.
    
   0.655
LOC115164576
Probable cytosolic iron-sulfur protein assembly protein ciao1-B.
    
   0.655
LOC115202915
Phosphorylase b kinase regulatory subunit beta-like.
    
   0.628
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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