Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
ENSSTUP00000011642CDK5 regulatory subunit associated protein 2. (1159 aa)    
Predicted Functional Partners:
LOC115161112
Centromere protein J-like.
    
 0.882
cenpj
Centromere protein J.
    
 0.882
ENSSTUP00000025409
annotation not available
    
 0.882
LOC115205223
Malate synthase-like.
   
 
 0.868
plk2
Polo like kinase 2.
    
 0.797
LOC115169771
Serine/threonine-protein kinase PLK3-like.
    
 0.797
PLK1
Polo like kinase 1.
    
 0.797
LOC115200258
Serine/threonine-protein kinase PLK2-like.
    
 0.797
LOC115156998
Serine/threonine-protein kinase PLK3-like.
    
 0.797
LOC115164387
Serine/threonine-protein kinase PLK2-like.
    
 0.797
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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