Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011693Rho GTPase activating protein 17a. (1829 aa)    
Predicted Functional Partners:
LOC115163725
Angiomotin-like protein 1.
    
 0.934
LOC115148806
Angiomotin-like.
    
 0.912
LOC115154275
Angiomotin-like.
    
 0.912
LOC115150657
Cell division control protein 42 homolog.
   
 0.833
ENSSTUP00000047803
annotation not available
   
 0.833
LOC115165776
Cell division control protein 42 homolog.
   
 0.833
CDC42
Cell division control protein 42 homolog.
   
 0.833
LOC115177487
Cell division control protein 42 homolog.
   
 0.816
LOC115173517
Cell division control protein 42 homolog.
   
 0.816
LOC115175951
Cell division control protein 42 homolog.
   
 0.816
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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