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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011693Rho GTPase activating protein 17a. (1829 aa)    
Predicted Functional Partners:
LOC115163725
Angiomotin-like protein 1.
    
 0.911
LOC115148806
Angiomotin-like.
    
 0.884
LOC115154275
Angiomotin-like.
    
 0.884
LOC115150657
Cell division control protein 42 homolog.
   
 0.787
ENSSTUP00000047803
annotation not available
   
 0.787
LOC115165776
Cell division control protein 42 homolog.
   
 0.787
CDC42
Cell division control protein 42 homolog.
   
 0.787
LOC115177487
Cell division control protein 42 homolog.
   
 0.775
LOC115173517
Cell division control protein 42 homolog.
   
 0.775
LOC115175951
Cell division control protein 42 homolog.
   
 0.775
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.