Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011720annotation not available (795 aa)    
Predicted Functional Partners:
DERL1
Derlin-1-like.
   
 0.939
LOC115181388
Derlin-1-like.
   
 0.939
LOC115154243
Derlin-2-like.
   
 0.935
LOC115148778
Derlin-2.
   
 0.935
os9
OS9 endoplasmic reticulum lectin.
   
 0.895
LOC115201555
Endoplasmic reticulum lectin 1-like.
   
 0.895
ENSSTUP00000038875
annotation not available
   
 0.895
LOC115152807
Endoplasmic reticulum lectin 1-like.
   
 0.895
LOC115167072
E3 ubiquitin-protein ligase synoviolin-like.
   
 0.855
LOC115205736
E3 ubiquitin-protein ligase synoviolin-like.
   
 0.855
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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