Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011722annotation not available (971 aa)    
Predicted Functional Partners:
LOC115206565
Integrin-linked protein kinase-like.
   
 0.965
ILK
Integrin-linked protein kinase.
   
 0.965
LOC115153616
Vinculin-like.
   
 0.960
ENSSTUP00000015921
Vinculin b.
   
 0.960
VCL
Vinculin.
   
 0.960
CRK
Adapter molecule crk-like.
    
 0.952
ENSSTUP00000047366
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 0.945
ENSSTUP00000078324
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 0.945
parvg
Parvin gamma.
   
 0.944
ENSSTUP00000018102
annotation not available
    
 0.940
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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