Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000011732annotation not available (77 aa)    
Predicted Functional Partners:
LOC115154260
Spindle and kinetochore-associated protein 2-like.
    
 0.991
LOC115148791
Spindle and kinetochore-associated protein 2.
    
 0.991
ska3
Spindle and kinetochore associated complex subunit 3.
   
 0.989
LOC115173977
Shugoshin 1-like.
   
 
 0.973
LOC115164996
Kinetochore protein NDC80 homolog.
   
 0.971
ENSSTUP00000083680
NDC80 kinetochore complex component.
   
 0.971
nuf2
NUF2 component of NDC80 kinetochore complex.
   
 0.965
spc25
SPC25 component of NDC80 kinetochore complex.
   
 0.928
LOC115171359
Kinetochore protein Spc24-like.
   
 0.922
ENSSTUP00000033589
Extra spindle pole bodies like 1, separase.
   
 
 0.895
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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