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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115158082Microtubule-associated protein 1B-like. (1405 aa)    
Predicted Functional Partners:
LOC115205472
Synaptic functional regulator FMR1-like.
    
 
 0.674
LOC115175053
Synaptic functional regulator FMR1-like.
    
 
 0.674
LOC115194346
Fragile X mental retardation syndrome-related protein 1-like.
    
 
 0.651
ENSSTUP00000090548
Fragile X mental retardation, autosomal homolog 1.
    
 
 0.651
LOC115198346
Fragile X mental retardation syndrome-related protein 1-like.
    
 
 0.651
LOC115151842
Microtubule-associated proteins 1A/1B light chain 3B.
    
 0.630
LOC115196926
Microtubule-associated proteins 1A/1B light chain 3B-like.
    
 0.630
LOC115151102
Microtubule-associated proteins 1A/1B light chain 3A.
    
 0.630
LOC115208534
Microtubule-associated proteins 1A/1B light chain 3C-like.
    
 0.560
LOC115178512
Microtubule-associated proteins 1A/1B light chain 3C-like.
    
 0.560
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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