Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115158082Microtubule-associated protein 1B-like. (1405 aa)    
Predicted Functional Partners:
LOC115203854
Microtubule-associated protein 1B-like.
     
  0.815
LOC115159803
Microtubule-associated protein 1B-like.
     
  0.815
LOC115205472
Synaptic functional regulator FMR1-like.
    
 
 0.733
LOC115175053
Synaptic functional regulator FMR1-like.
    
 
 0.733
ENSSTUP00000031633
Microtubule-associated protein 1Ab.
     
  0.717
ENSSTUP00000042851
Microtubule-associated protein 1Aa.
     
  0.717
LOC115197116
Microtubule-associated protein 1B-like.
     
  0.717
LOC115203379
Microtubule-associated protein 1B-like.
     
  0.717
LOC115194346
Fragile X mental retardation syndrome-related protein 1-like.
    
 
 0.704
ENSSTUP00000090548
Fragile X mental retardation, autosomal homolog 1.
    
 
 0.704
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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