ENSSTUP00000012012 protein (Salmo trutta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSTUP00000012012

annotation not available (136 aa)

Predicted Functional Partners:

LOC115170775

0.917

PPP4C

0.917

ENSSTUP00000033554

0.913

ENSSTUP00000035601

0.902

ENSSTUP00000082156

0.902

LOC115167379

0.901

LOC115148561

0.901

LOC115160075

0.901

LOC115167379-2

0.901

LOC115154024

0.901

Your Current Organism:

Salmo trutta

NCBI taxonomy Id: 8032
Other names: S. trutta, river trout

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTUP00000012012	ENSSTUP00000033554	ENSSTUP00000012012	ENSSTUP00000033554	annotation not available	Protein phosphatase 2 phosphatase activator.	0.913
ENSSTUP00000012012	ENSSTUP00000035601	ENSSTUP00000012012	ENSSTUP00000035601	annotation not available	annotation not available	0.902
ENSSTUP00000012012	ENSSTUP00000082156	ENSSTUP00000012012	ENSSTUP00000082156	annotation not available	annotation not available	0.902
ENSSTUP00000012012	LOC115148561	ENSSTUP00000012012	ENSSTUP00000006277	annotation not available	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like.	0.901
ENSSTUP00000012012	LOC115154024	ENSSTUP00000012012	ENSSTUP00000056520	annotation not available	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like.	0.901
ENSSTUP00000012012	LOC115160075	ENSSTUP00000012012	ENSSTUP00000015051	annotation not available	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform.	0.901
ENSSTUP00000012012	LOC115167379	ENSSTUP00000012012	ENSSTUP00000006205	annotation not available	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like.	0.901
ENSSTUP00000012012	LOC115167379-2	ENSSTUP00000012012	ENSSTUP00000046648	annotation not available	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like.	0.901
ENSSTUP00000012012	LOC115170775	ENSSTUP00000012012	ENSSTUP00000055943	annotation not available	Serine/threonine-protein phosphatase 4 catalytic subunit B.	0.917
ENSSTUP00000012012	PPP4C	ENSSTUP00000012012	ENSSTUP00000072417	annotation not available	Serine/threonine-protein phosphatase 4 catalytic subunit B.	0.917
ENSSTUP00000033554	ENSSTUP00000012012	ENSSTUP00000033554	ENSSTUP00000012012	Protein phosphatase 2 phosphatase activator.	annotation not available	0.913
ENSSTUP00000033554	ENSSTUP00000035601	ENSSTUP00000033554	ENSSTUP00000035601	Protein phosphatase 2 phosphatase activator.	annotation not available	0.967
ENSSTUP00000033554	ENSSTUP00000082156	ENSSTUP00000033554	ENSSTUP00000082156	Protein phosphatase 2 phosphatase activator.	annotation not available	0.967
ENSSTUP00000033554	LOC115148561	ENSSTUP00000033554	ENSSTUP00000006277	Protein phosphatase 2 phosphatase activator.	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like.	0.871
ENSSTUP00000033554	LOC115154024	ENSSTUP00000033554	ENSSTUP00000056520	Protein phosphatase 2 phosphatase activator.	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like.	0.871
ENSSTUP00000033554	LOC115160075	ENSSTUP00000033554	ENSSTUP00000015051	Protein phosphatase 2 phosphatase activator.	Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform.	0.871
ENSSTUP00000033554	LOC115167379	ENSSTUP00000033554	ENSSTUP00000006205	Protein phosphatase 2 phosphatase activator.	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like.	0.871
ENSSTUP00000033554	LOC115167379-2	ENSSTUP00000033554	ENSSTUP00000046648	Protein phosphatase 2 phosphatase activator.	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like.	0.871
ENSSTUP00000033554	LOC115170775	ENSSTUP00000033554	ENSSTUP00000055943	Protein phosphatase 2 phosphatase activator.	Serine/threonine-protein phosphatase 4 catalytic subunit B.	0.927
ENSSTUP00000033554	PPP4C	ENSSTUP00000033554	ENSSTUP00000072417	Protein phosphatase 2 phosphatase activator.	Serine/threonine-protein phosphatase 4 catalytic subunit B.	0.927