Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
ENSSTUP00000012118Lipoyl(octanoyl) transferase 2. (189 aa)    
Predicted Functional Partners:
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
   
 0.978
ENSSTUP00000048818
annotation not available
  
 
 0.972
LOC115196254
Lipoyltransferase 1, mitochondrial-like.
  
 0.967
LOC115196704
Glycine cleavage system H protein, mitochondrial-like.
   
 0.947
ENSSTUP00000081380
Glycine cleavage system protein H (aminomethyl carrier), a.
   
 0.947
LOC115203069
Glycine cleavage system H protein, mitochondrial-like.
   
 0.947
LOC115167273
Glycine cleavage system H protein, mitochondrial-like.
   
 0.947
ENSSTUP00000013526
annotation not available
   
 0.941
LOC115173785
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial-like.
    
 0.917
mecr
Mitochondrial trans-2-enoyl-CoA reductase.
  
 
 0.915
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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