STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012122annotation not available (358 aa)    
Predicted Functional Partners:
timp4
TIMP metallopeptidase inhibitor 4.
    
 0.681
LOC115198697
Metalloproteinase inhibitor 3-like.
    
 0.595
TIMP3
Metalloproteinase inhibitor 3-like.
    
 0.595
LOC115189503
Metalloproteinase inhibitor 2-like.
    
 0.572
LOC115189502
Metalloproteinase inhibitor 2-like.
    
 0.572
LOC115207305
Metalloproteinase inhibitor 2-like.
    
 0.572
LOC115171819
Metalloproteinase inhibitor 2-like.
    
 0.572
LOC115171822
Metalloproteinase inhibitor 2-like.
    
 0.572
LOC115189502-2
Metalloproteinase inhibitor 2-like.
    
 0.572
LOC115189501
Metalloproteinase inhibitor 2-like.
    
 0.572
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.