Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115154275Angiomotin-like. (1007 aa)    
Predicted Functional Partners:
LOC115204567
Merlin-like.
    
 0.989
nf2
Neurofibromin 2.
    
 0.984
YAP1
Transcriptional coactivator YAP1-like.
    
 0.956
LOC115206739
Transcriptional coactivator YAP1-like.
    
 0.956
LOC115158820
WW domain-containing transcription regulator protein 1-like.
    
 0.956
LOC115192171
WW domain-containing transcription regulator protein 1-like.
    
 0.956
LOC115162041
MAGUK p55 subfamily member 5-A-like.
    
 0.955
ENSSTUP00000077560
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5).
    
 0.955
LOC115172301
MAGUK p55 subfamily member 5-A-like.
    
 0.955
LOC115174607
MAGUK p55 subfamily member 5-A-like.
    
 0.955
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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