Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115185329Angiopoietin-1-like. (554 aa)    
Predicted Functional Partners:
LOC115160173
Tyrosine-protein kinase receptor Tie-2-like.
   
 0.949
LOC115149540
Tyrosine-protein kinase receptor Tie-2-like.
   
 0.949
LOC115192211
Tyrosine-protein kinase receptor Tie-1-like.
   
 0.911
ENSSTUP00000102706
Tyrosine kinase with immunoglobulin-like and EGF-like domains 1.
   
 0.911
flt3
Fms related tyrosine kinase 3.
    
 0.861
ENSSTUP00000029861
annotation not available
   
 0.853
ENSSTUP00000097928
annotation not available
   
 0.853
ENSSTUP00000062025
annotation not available
     
 0.848
erbb2
Erb-b2 receptor tyrosine kinase 2.
     
 0.848
ENSSTUP00000060930
annotation not available
     
 0.834
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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