Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012162Sortilin-related VPS10 domain containing receptor 2. (1001 aa)    
Predicted Functional Partners:
LOC115150672
Sortilin-like.
    
 0.882
LOC115165329
Sortilin-like.
    
 0.882
LOC115168686
Sortilin-like.
    
 0.882
LOC115199093
Sortilin-like.
    
 0.844
LOC115180367
Sortilin-like.
    
 0.844
ENSSTUP00000000880
annotation not available
    
 0.792
ENSSTUP00000026568
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.792
LOC115162007
Tumor necrosis factor receptor superfamily member 16-like.
    
 0.759
LOC115202924
Vacuolar protein sorting-associated protein 35-like.
    
 
 0.735
LOC115167429
Vacuolar protein sorting-associated protein 35.
    
 
 0.735
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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