Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RAB11A-2Ras-related protein Rab-11A. (215 aa)    
Predicted Functional Partners:
LOC115173046
Rab11 family-interacting protein 5-like.
    
 0.978
LOC115159423
Rab11 family-interacting protein 1-like.
   
 0.935
LOC115153014
Rab11 family-interacting protein 2-like.
   
 0.935
LOC115169674
Rab11 family-interacting protein 1-like.
   
 0.935
LOC115193995
Rab11 family-interacting protein 2-like.
   
 0.935
LOC115170719
Rab11 family-interacting protein 5-like.
   
 0.935
ENSSTUP00000074277
annotation not available
   
 0.935
LOC115200122
Rab11 family-interacting protein 1-like.
   
 0.935
LOC115164525
Rab11 family-interacting protein 1-like.
   
 0.935
LOC115192287
Exocyst complex component 2-like.
    
 0.869
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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