STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115159130Notch-regulated ankyrin repeat-containing protein A. (112 aa)    
Predicted Functional Partners:
LOC115199909
Neurogenic locus notch homolog protein 1-like.
    
 0.948
LOC115164727
Neurogenic locus notch homolog protein 1-like.
    
 0.948
LOC115159080
Neurogenic locus notch homolog protein 1-like.
    
 0.948
ENSSTUP00000005444
Recombination signal binding protein for immunoglobulin kappa J region b.
   
 
 0.927
LOC115187378
Recombining binding protein suppressor of hairless-like.
   
 
 0.927
LOC115187377
Recombining binding protein suppressor of hairless-like.
   
 
 0.927
ENSSTUP00000062378
Recombination signal binding protein for immunoglobulin kappa J region b.
   
 
 0.927
ENSSTUP00000064903
Recombination signal binding protein for immunoglobulin kappa J region-like.
   
 
 0.864
uevld
UEV and lactate/malate dehyrogenase domains.
   
 0.853
LOC115198276
RING finger protein 227-like.
    
 0.774
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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