STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012175annotation not available (351 aa)    
Predicted Functional Partners:
LOC115157302
Heterogeneous nuclear ribonucleoprotein C-like.
  
0.913
LOC115194526
Heterogeneous nuclear ribonucleoprotein C-like.
  
0.912
ENSSTUP00000023405
Heterogeneous nuclear ribonucleoprotein M.
   
 0.849
LOC115158186
Heterogeneous nuclear ribonucleoprotein M-like.
   
 0.849
ncbp2
Nuclear cap binding protein subunit 2.
    
 0.803
ENSSTUP00000001683
annotation not available
   
  0.797
LOC115169781
Ubiquitin-like protein FUBI.
   
  0.797
ENSSTUP00000060436
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.797
LOC115172919
RNA-binding motif protein, X chromosome-like.
   
0.797
ENSSTUP00000077803
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
  0.797
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.