Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YAP1Transcriptional coactivator YAP1-like. (469 aa)    
Predicted Functional Partners:
LOC115174882
Serine/threonine-protein kinase LATS1-like.
    
 0.969
LATS1
Serine/threonine-protein kinase LATS1-like.
    
 0.969
LOC115155759
Serine/threonine-protein kinase LATS2-like.
    
 0.963
LOC115161091
Serine/threonine-protein kinase LATS2-like.
    
 0.963
LOC115148806
Angiomotin-like.
    
 0.956
LOC115154275
Angiomotin-like.
    
 0.956
LOC115190950
Serine/threonine-protein kinase 3-like.
    
 0.939
stk4
Serine/threonine kinase 4.
    
 0.939
STK3
Serine/threonine-protein kinase 3.
    
 0.939
LOC115163725
Angiomotin-like protein 1.
    
 0.937
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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