LOC115185345 protein (Salmo trutta) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

LOC115185345

Syndecan-2-like. (216 aa)

Predicted Functional Partners:

LOC115175042

0.980

ENSSTUP00000067899

0.966

SDC3

0.966

ENSSTUP00000006019

0.946

LOC115160597

0.946

LOC115155513

0.946

ENSSTUP00000056605

0.946

LOC115205553

0.946

LOC115186289

0.946

LOC115160818

0.946

Your Current Organism:

Salmo trutta

NCBI taxonomy Id: 8032
Other names: S. trutta, river trout

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTUP00000006019	ENSSTUP00000067899	ENSSTUP00000006019	ENSSTUP00000067899	Glypican 2.	annotation not available	0.761
ENSSTUP00000006019	LOC115175042	ENSSTUP00000006019	ENSSTUP00000105637	Glypican 2.	Syndecan-1-like.	0.924
ENSSTUP00000006019	LOC115185345	ENSSTUP00000006019	ENSSTUP00000012194	Glypican 2.	Syndecan-2-like.	0.946
ENSSTUP00000006019	SDC3	ENSSTUP00000006019	ENSSTUP00000103269	Glypican 2.	Syndecan 3.	0.761
ENSSTUP00000056605	ENSSTUP00000067899	ENSSTUP00000056605	ENSSTUP00000067899	annotation not available	annotation not available	0.567
ENSSTUP00000056605	LOC115175042	ENSSTUP00000056605	ENSSTUP00000105637	annotation not available	Syndecan-1-like.	0.924
ENSSTUP00000056605	LOC115185345	ENSSTUP00000056605	ENSSTUP00000012194	annotation not available	Syndecan-2-like.	0.946
ENSSTUP00000056605	SDC3	ENSSTUP00000056605	ENSSTUP00000103269	annotation not available	Syndecan 3.	0.567
ENSSTUP00000067899	ENSSTUP00000006019	ENSSTUP00000067899	ENSSTUP00000006019	annotation not available	Glypican 2.	0.761
ENSSTUP00000067899	ENSSTUP00000056605	ENSSTUP00000067899	ENSSTUP00000056605	annotation not available	annotation not available	0.567
ENSSTUP00000067899	LOC115155513	ENSSTUP00000067899	ENSSTUP00000007846	annotation not available	Glypican-6-like.	0.567
ENSSTUP00000067899	LOC115160597	ENSSTUP00000067899	ENSSTUP00000007196	annotation not available	Glypican-4-like.	0.711
ENSSTUP00000067899	LOC115160818	ENSSTUP00000067899	ENSSTUP00000115353	annotation not available	Glypican-6-like.	0.567
ENSSTUP00000067899	LOC115175042	ENSSTUP00000067899	ENSSTUP00000105637	annotation not available	Syndecan-1-like.	0.963
ENSSTUP00000067899	LOC115185345	ENSSTUP00000067899	ENSSTUP00000012194	annotation not available	Syndecan-2-like.	0.966
ENSSTUP00000067899	LOC115186289	ENSSTUP00000067899	ENSSTUP00000097869	annotation not available	Glypican-6-like.	0.567
ENSSTUP00000067899	LOC115205553	ENSSTUP00000067899	ENSSTUP00000094191	annotation not available	Glypican-4-like.	0.711
LOC115155513	ENSSTUP00000067899	ENSSTUP00000007846	ENSSTUP00000067899	Glypican-6-like.	annotation not available	0.567
LOC115155513	LOC115175042	ENSSTUP00000007846	ENSSTUP00000105637	Glypican-6-like.	Syndecan-1-like.	0.924
LOC115155513	LOC115185345	ENSSTUP00000007846	ENSSTUP00000012194	Glypican-6-like.	Syndecan-2-like.	0.946