STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115151653Mediator of RNA polymerase II transcription subunit 16-like. (837 aa)    
Predicted Functional Partners:
med1
Mediator complex subunit 1.
   
 0.972
med6
Mediator complex subunit 6.
    
 0.965
med23
Mediator complex subunit 23.
    
 0.959
ENSSTUP00000046446
Mediator complex subunit 31.
    
 0.955
MED14
Mediator of RNA polymerase II transcription subunit 14-like.
    
 0.946
LOC115155908
Mediator of RNA polymerase II transcription subunit 14-like.
    
 0.946
ENSSTUP00000059547
Mediator complex subunit 15.
    
 0.941
ENSSTUP00000073991
Mediator complex subunit 15.
    
 0.941
MED4
Mediator of RNA polymerase II transcription subunit 4.
    
 0.939
med10
Mediator of RNA polymerase II transcription subunit 10.
    
 0.939
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.