STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115185398Magnesium transporter MRS2 homolog, mitochondrial-like. (427 aa)    
Predicted Functional Partners:
pum1
Pumilio RNA binding family member 1.
    
   0.589
ENSSTUP00000103887
Pumilio RNA-binding family member 1.
    
   0.589
LOC115195665
Pumilio homolog 2-like.
    
   0.589
magt1
Magnesium transporter 1.
      
 0.543
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
      
 0.539
LOC115166855
U2 small nuclear ribonucleoprotein A'-like.
      
 0.539
LOC115164548
Mitoferrin-1-like.
    
 
 0.508
LOC115201571
Mitoferrin-2-like.
    
 
 0.508
LOC115200098
Mitoferrin-1-like.
    
 
 0.508
SLC25A28
Mitoferrin-2-like.
    
 
 0.508
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.