sigirr protein (Salmo trutta) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

sigirr

Single Ig and TIR domain containing. (441 aa)

Predicted Functional Partners:

UNC79

0.885

UNC79-2

0.885

LOC115203800

0.794

RANBP2

0.790

ENSSTUP00000027355

0.790

LOC115161061

0.790

ENSSTUP00000075660

0.770

ENSSTUP00000027140

0.758

ENSSTUP00000063902

0.758

ENSSTUP00000041613

0.737

Your Current Organism:

Salmo trutta

NCBI taxonomy Id: 8032
Other names: S. trutta, river trout

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTUP00000027140	ENSSTUP00000027355	ENSSTUP00000027140	ENSSTUP00000027355	annotation not available	annotation not available	0.999
ENSSTUP00000027140	ENSSTUP00000063902	ENSSTUP00000027140	ENSSTUP00000063902	annotation not available	annotation not available	0.999
ENSSTUP00000027140	LOC115161061	ENSSTUP00000027140	ENSSTUP00000085656	annotation not available	E3 SUMO-protein ligase RanBP2-like.	0.999
ENSSTUP00000027140	RANBP2	ENSSTUP00000027140	ENSSTUP00000026623	annotation not available	RAN binding protein 2.	0.999
ENSSTUP00000027140	sigirr	ENSSTUP00000027140	ENSSTUP00000012253	annotation not available	Single Ig and TIR domain containing.	0.758
ENSSTUP00000027355	ENSSTUP00000027140	ENSSTUP00000027355	ENSSTUP00000027140	annotation not available	annotation not available	0.999
ENSSTUP00000027355	ENSSTUP00000063902	ENSSTUP00000027355	ENSSTUP00000063902	annotation not available	annotation not available	0.999
ENSSTUP00000027355	LOC115161061	ENSSTUP00000027355	ENSSTUP00000085656	annotation not available	E3 SUMO-protein ligase RanBP2-like.	0.942
ENSSTUP00000027355	RANBP2	ENSSTUP00000027355	ENSSTUP00000026623	annotation not available	RAN binding protein 2.	0.942
ENSSTUP00000027355	sigirr	ENSSTUP00000027355	ENSSTUP00000012253	annotation not available	Single Ig and TIR domain containing.	0.790
ENSSTUP00000041613	UNC79	ENSSTUP00000041613	ENSSTUP00000010086	annotation not available	Unc-79 homolog, NALCN channel complex subunit.	0.766
ENSSTUP00000041613	UNC79-2	ENSSTUP00000041613	ENSSTUP00000032884	annotation not available	Unc-79 homolog, NALCN channel complex subunit.	0.766
ENSSTUP00000041613	sigirr	ENSSTUP00000041613	ENSSTUP00000012253	annotation not available	Single Ig and TIR domain containing.	0.737
ENSSTUP00000063902	ENSSTUP00000027140	ENSSTUP00000063902	ENSSTUP00000027140	annotation not available	annotation not available	0.999
ENSSTUP00000063902	ENSSTUP00000027355	ENSSTUP00000063902	ENSSTUP00000027355	annotation not available	annotation not available	0.999
ENSSTUP00000063902	LOC115161061	ENSSTUP00000063902	ENSSTUP00000085656	annotation not available	E3 SUMO-protein ligase RanBP2-like.	0.999
ENSSTUP00000063902	RANBP2	ENSSTUP00000063902	ENSSTUP00000026623	annotation not available	RAN binding protein 2.	0.999
ENSSTUP00000063902	sigirr	ENSSTUP00000063902	ENSSTUP00000012253	annotation not available	Single Ig and TIR domain containing.	0.758
ENSSTUP00000075660	LOC115203800	ENSSTUP00000075660	ENSSTUP00000031885	MYD88 innate immune signal transduction adaptor.	Interleukin-1 beta-like.	0.553
ENSSTUP00000075660	sigirr	ENSSTUP00000075660	ENSSTUP00000012253	MYD88 innate immune signal transduction adaptor.	Single Ig and TIR domain containing.	0.770