STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115170555Uncharacterized LOC115170555. (388 aa)    
Predicted Functional Partners:
COX2
Cytochrome c oxidase subunit II.
    
 0.897
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.848
LOC115192860
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.848
ENSSTUP00000116313
annotation not available
   
 0.848
COX3
Cytochrome c oxidase subunit III.
    
 0.824
COX7C
Cytochrome c oxidase subunit 7C, mitochondrial-like.
   
 0.805
LOC115164904
Cytochrome c oxidase subunit 7C, mitochondrial-like.
   
 0.805
LOC115173997
Cytochrome b-c1 complex subunit 7-like.
   
 0.782
ENSSTUP00000006776
Cytochrome c oxidase subunit 6A1.
   
 0.777
ENSSTUP00000022412
annotation not available
   
 0.777
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.