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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012284Protein tyrosine phosphatase receptor type Fa. (1814 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1.
   
 0.911
CTNNB1-2
Catenin beta-1-like.
   
 0.911
LOC115205813
Interleukin-1 receptor accessory protein-like.
    
 0.910
LOC115200964
Leucine-rich repeat-containing protein 4B-like.
    
 0.905
LOC115160166
Leucine-rich repeat-containing protein 4B-like.
    
 0.905
LOC115171492
Leucine-rich repeat-containing protein 4B-like.
    
 0.904
LOC115203333
Leucine-rich repeat-containing protein 4B-like.
    
 0.904
LOC115179295
Interleukin-1 receptor accessory protein-like 1.
   
 0.902
LOC115192162
Insulin receptor-like.
    
  0.891
irs1
Insulin receptor substrate 1.
    
  0.890
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.