Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012289Transient receptor potential cation channel, subfamily C, member 6b. (840 aa)    
Predicted Functional Partners:
trpc1
Transient receptor potential cation channel subfamily C member 1.
    
 0.892
ENSSTUP00000003786
Protein kinase C, alpha, b.
   
 0.805
PRKCB
Protein kinase C beta.
   
 0.805
LOC115182231
Protein kinase C beta type.
   
 0.805
ENSSTUP00000073875
Protein kinase C, alpha, a.
   
 0.805
PRKCA
Protein kinase C alpha type.
   
 0.805
ENSSTUP00000094359
Protein kinase C, alpha, b.
   
 0.805
ENSSTUP00000094403
annotation not available
   
 0.805
nphs2
NPHS2 stomatin family member, podocin.
    
 
 0.735
ENSSTUP00000013883
Bone morphogenetic protein receptor, type II b (serine/threonine kinase).
    
 0.725
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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