Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012299annotation not available (142 aa)    
Predicted Functional Partners:
LOC115175835
GTP-binding protein Rit1-like.
    
 0.571
LOC115173635
GTP-binding protein Rit1-like.
    
 0.571
LOC115196009
Ras-related protein M-Ras.
    
 0.551
LOC115196011
Ras-related protein ralB-B-like.
    
 0.551
LOC115207704
GTPase HRas-like.
    
 0.551
RAP2A
Ras-related protein Rap-2a-like.
    
 0.551
ENSSTUP00000006569
HRas proto-oncogene, GTPase b.
    
 0.551
rala
RAS like proto-oncogene A.
    
 0.551
LOC115152163
GTPase KRas.
    
 0.551
LOC115151645
GTP-binding protein Di-Ras1.
    
 0.551
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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