Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012404annotation not available (496 aa)    
Predicted Functional Partners:
LOC115199789
Serine/threonine-protein kinase Chk2-like.
    
 0.882
LOC115164873
Serine/threonine-protein kinase Chk2-like.
    
 0.882
RFXAP
Regulatory factor X-associated protein-like.
    
 0.859
LOC115204639
Regulatory factor X-associated protein-like.
    
 0.859
LOC115151792
DNA-binding protein RFXANK-like.
    
 0.838
LOC115203820
Ankyrin repeat family A protein 2-like.
    
 0.730
LOC115159852
Ankyrin repeat family A protein 2-like.
    
 0.730
LOC115152953
Forkhead box protein J1-B-like.
    
 
 0.724
LOC115171421
Forkhead box protein J1-A-like.
    
 
 0.724
LOC115202414
Forkhead box protein J1-A-like.
    
 
 0.724
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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