Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115166748Lactase-like protein. (570 aa)    
Predicted Functional Partners:
LOC115167493
Fibroblast growth factor 19-like.
    
 0.899
LOC115198918
Fibroblast growth factor 23-like.
    
 0.895
LOC115197927
Fibroblast growth factor 23-like.
    
 0.895
LOC115180376
Fibroblast growth factor 23-like.
    
 0.895
ENSSTUP00000096437
annotation not available
    
 0.895
galm
Galactose mutarotase.
  
 
 0.887
LOC115164552
Fibroblast growth factor receptor 1-A-like.
    
 0.883
ENSSTUP00000055375
Fibroblast growth factor receptor 1a.
    
 0.883
glb1
Galactosidase beta 1.
  
 
 0.850
LOC115154282
Fibroblast growth factor receptor 4-like.
    
 0.846
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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