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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115159434Protein phosphatase PTC7 homolog. (297 aa)    
Predicted Functional Partners:
LOC115157989
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like.
   
 0.686
LOC115151555
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like.
   
 0.686
TAB2
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like.
   
 0.663
LOC115194003
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like.
   
 0.663
ENSSTUP00000046446
Mediator complex subunit 31.
    
   0.653
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.640
ENSSTUP00000065774
annotation not available
  
 
 0.640
LOC115175927
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like.
   
 0.628
ENSSTUP00000003019
Pyruvate dehydrogenase E1 beta subunit.
   
 0.628
LOC115177377
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like.
   
 0.628
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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