Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012417DDB1 and CUL4 associated factor 15. (637 aa)    
Predicted Functional Partners:
ENSSTUP00000001593
DET1 and DDB1 associated 1.
    
 0.788
DDA1
DET1 and DDB1 associated 1.
    
 0.788
DDA1-2
DET1- and DDB1-associated protein 1.
    
 0.788
DDA1-3
DET1- and DDB1-associated protein 1-like.
    
 0.788
LOC115205069
cullin-4B-like.
    
 0.720
CUL4B
cullin-4B-like.
    
 0.720
LOC115179496
cullin-4A-like.
    
 0.720
LOC115202851
DNA damage-binding protein 1.
    
 
 0.683
LOC115167557
DNA damage-binding protein 1-like.
    
 
 0.683
ENSSTUP00000007422
annotation not available
     
 0.614
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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