close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115151655Membralin-like. (728 aa)    
Predicted Functional Partners:
LOC115156497
Transmembrane and ubiquitin-like domain-containing protein 1.
    
 
 0.657
LOC115203994
Transmembrane and ubiquitin-like domain-containing protein 2.
    
 
 0.547
LOC115171547
Transmembrane and ubiquitin-like domain-containing protein 1.
    
 
 0.547
smpdl3b
Sphingomyelin phosphodiesterase acid like 3B.
      
 0.546
ngly1
N-glycanase 1.
      
 0.541
ENSSTUP00000032897
Cache domain containing 1.
      
 0.539
ENSSTUP00000092658
Cache domain containing 1.
      
 0.539
ENSSTUP00000014071
annotation not available
      
 0.533
EMC1
ER membrane protein complex subunit 1.
      
 0.533
LOC115154359
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A.
      
 0.509
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.