Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115152956Myocardin-related transcription factor B-like. (1012 aa)    
Predicted Functional Partners:
LOC115153612
Serum response factor-like.
    
 0.889
LOC115208480
Serum response factor-like.
    
 0.889
LOC115178896
Serum response factor-like.
    
 0.889
LOC115194063
Serum response factor-like.
    
 0.889
ENSSTUP00000026749
SH3 and multiple ankyrin repeat domains 3a.
    
 0.863
ENSSTUP00000028410
annotation not available
    
 0.863
ENSSTUP00000031671
annotation not available
    
 0.863
ENSSTUP00000064847
SH3 and multiple ankyrin repeat domains 2b.
    
 0.863
ENSSTUP00000068108
annotation not available
    
 0.863
ENSSTUP00000068159
SH3 and multiple ankyrin repeat domains 1.
    
 0.863
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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