Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012476annotation not available (149 aa)    
Predicted Functional Partners:
ENSSTUP00000105000
annotation not available
   
 0.831
ENSSTUP00000114426
annotation not available
    
 0.810
ENSSTUP00000090321
annotation not available
    
 0.807
CATSPER3
Cation channel sperm associated 3.
    
 0.750
nme8
NME/NM23 family member 8.
    
   0.631
LOC115155393
Thioredoxin domain-containing protein 3 homolog.
    
   0.631
wdr90
WD repeat domain 90.
    
   0.608
smim4
Small integral membrane protein 4.
      
 0.582
ENSSTUP00000078202
Lipid droplet associated hydrolase.
      
 0.564
LOC115176949
EF-hand domain-containing family member B-like.
   
 
 0.556
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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