Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012483annotation not available (308 aa)    
Predicted Functional Partners:
LOC115178533
Cyclic AMP-dependent transcription factor ATF-4-like.
   
 0.986
LOC115147454
Cyclic AMP-dependent transcription factor ATF-4-like.
   
 0.986
LOC115196317
Cyclic AMP-dependent transcription factor ATF-4-like.
   
 0.974
LOC115170922
Cyclic AMP-dependent transcription factor ATF-4-like.
   
 0.974
ENSSTUP00000027871
X-box binding protein 1.
    
 0.954
ENSSTUP00000076681
X-box binding protein 1.
    
 0.954
LOC115175897
Cyclic AMP-dependent transcription factor ATF-6 beta-like.
   
 0.952
LOC115173561
Cyclic AMP-dependent transcription factor ATF-6 beta-like.
   
 0.952
LOC115156794
Cyclic AMP-dependent transcription factor ATF-6 alpha-like.
   
 0.942
atf6
Activating transcription factor 6.
   
 0.942
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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