STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115151432Homocysteine S-methyltransferase-like. (335 aa)    
Predicted Functional Partners:
CTH
Cystathionine gamma-lyase-like.
  
 
 0.963
CTH-2
Cystathionine gamma-lyase-like.
  
 
 0.962
LOC115168944
Methylenetetrahydrofolate reductase-like.
  
 
 0.943
LOC115166009
Methylenetetrahydrofolate reductase-like.
  
 
 0.943
ENSSTUP00000011835
Phosphoribosylglycinamide formyltransferase.
  
 
 0.934
gart
annotation not available
  
 
 0.934
ENSSTUP00000001977
annotation not available
  
 0.913
ENSSTUP00000012541
annotation not available
  
 
 0.913
LOC115153063
Serine racemase-like.
  
 0.913
LOC115180232
Phenylserine dehydratase-like.
  
 0.911
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.