Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012549PR domain containing 1a, with ZNF domain. (934 aa)    
Predicted Functional Partners:
LOC115154663
Transcription factor Sox-17-alpha-A-like.
    
 0.767
LOC115195773
Transcription factor Sox-17-alpha-A-like.
    
 0.767
kiz
Kizuna centrosomal protein.
    
  0.749
LOC115203981
Histone-lysine N-methyltransferase EHMT1-like.
    
 0.737
ENSSTUP00000049935
Euchromatic histone-lysine N-methyltransferase 1a.
    
 0.737
LOC115176004
Histone-lysine N-methyltransferase EHMT2-like.
    
 0.737
LOC115164720
Histone-lysine N-methyltransferase EHMT1-like.
    
 0.737
LOC115173409
Histone-lysine N-methyltransferase EHMT2-like.
    
 0.737
LOC115159671
Histone-lysine N-methyltransferase EHMT1-like.
    
 0.737
LOC115168722
Transcription factor Sox-18A-like.
    
 0.715
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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