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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115192208Interferon-induced protein with tetratricopeptide repeats 2-like. (429 aa)    
Predicted Functional Partners:
LOC115203622
RNA polymerase-associated protein LEO1-like.
    
 0.952
LOC115182541
RNA polymerase-associated protein LEO1-like.
    
 0.952
ENSSTUP00000023803
Adenylate kinase 9.
   
 0.874
LOC115170290
cyclin-A2-like.
    
 0.842
nudt12
Nudix hydrolase 12.
   
  0.842
LOC115153320
Anaphase-promoting complex subunit 1-like.
    
 0.832
eif2ak3
Eukaryotic translation initiation factor 2 alpha kinase 3.
   
  0.831
eif2ak2
Eukaryotic translation initiation factor 2 alpha kinase 2.
   
 0.829
LOC115155450
Interferon-induced, double-stranded RNA-activated protein kinase-like.
   
 0.829
ENSSTUP00000013327
annotation not available
    
 0.813
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.