Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115192208Interferon-induced protein with tetratricopeptide repeats 2-like. (429 aa)    
Predicted Functional Partners:
eif2ak2
Eukaryotic translation initiation factor 2 alpha kinase 2.
   
 0.879
LOC115155450
Interferon-induced, double-stranded RNA-activated protein kinase-like.
   
 0.879
ifih1
Interferon induced with helicase C domain 1.
   
 0.828
rsad2
Radical S-adenosyl methionine domain containing 2.
   
 0.813
LOC115172835
Radical S-adenosyl methionine domain-containing protein 2-like.
   
 0.813
eif2ak3
Eukaryotic translation initiation factor 2 alpha kinase 3.
   
  0.807
LOC115203622
RNA polymerase-associated protein LEO1-like.
    
 0.796
LOC115182541
RNA polymerase-associated protein LEO1-like.
    
 0.796
LOC115198915
Ubl carboxyl-terminal hydrolase 18-like.
   
 0.794
LOC115180084
Ubl carboxyl-terminal hydrolase 18-like.
   
 0.794
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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