HOMER2 protein (Salmo trutta) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

HOMER2

Homer scaffold protein 2. (340 aa)

Predicted Functional Partners:

LOC115179270

0.883

LOC115174449

0.883

LOC115167630

0.880

LOC115161988

0.849

LOC115202675

0.849

ENSSTUP00000064800

0.849

LOC115172241

0.849

ENSSTUP00000013238

0.838

HOMER1-2

0.838

LOC115169941

0.838

Your Current Organism:

Salmo trutta

NCBI taxonomy Id: 8032
Other names: S. trutta, river trout

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTUP00000013238	ENSSTUP00000064800	ENSSTUP00000013238	ENSSTUP00000064800	annotation not available	annotation not available	0.849
ENSSTUP00000013238	HOMER1-2	ENSSTUP00000013238	ENSSTUP00000093254	annotation not available	Homer scaffold protein 1.	0.967
ENSSTUP00000013238	HOMER2	ENSSTUP00000013238	ENSSTUP00000012562	annotation not available	Homer scaffold protein 2.	0.838
ENSSTUP00000013238	LOC115161988	ENSSTUP00000013238	ENSSTUP00000008929	annotation not available	Metabotropic glutamate receptor 1-like.	0.849
ENSSTUP00000013238	LOC115167630	ENSSTUP00000013238	ENSSTUP00000045208	annotation not available	Homer protein homolog 1-like.	0.977
ENSSTUP00000013238	LOC115172241	ENSSTUP00000013238	ENSSTUP00000077421	annotation not available	Metabotropic glutamate receptor 1-like.	0.849
ENSSTUP00000013238	LOC115174449	ENSSTUP00000013238	ENSSTUP00000060217	annotation not available	Metabotropic glutamate receptor 1-like.	0.922
ENSSTUP00000013238	LOC115179270	ENSSTUP00000013238	ENSSTUP00000032459	annotation not available	Metabotropic glutamate receptor 1-like.	0.922
ENSSTUP00000013238	LOC115202675	ENSSTUP00000013238	ENSSTUP00000044367	annotation not available	Metabotropic glutamate receptor 5-like.	0.849
ENSSTUP00000064800	ENSSTUP00000013238	ENSSTUP00000064800	ENSSTUP00000013238	annotation not available	annotation not available	0.849
ENSSTUP00000064800	HOMER1-2	ENSSTUP00000064800	ENSSTUP00000093254	annotation not available	Homer scaffold protein 1.	0.864
ENSSTUP00000064800	HOMER2	ENSSTUP00000064800	ENSSTUP00000012562	annotation not available	Homer scaffold protein 2.	0.849
ENSSTUP00000064800	LOC115167630	ENSSTUP00000064800	ENSSTUP00000045208	annotation not available	Homer protein homolog 1-like.	0.930
ENSSTUP00000064800	LOC115169941	ENSSTUP00000064800	ENSSTUP00000104360	annotation not available	Homer protein homolog 3-like.	0.849
ENSSTUP00000064800	LOC115174449	ENSSTUP00000064800	ENSSTUP00000060217	annotation not available	Metabotropic glutamate receptor 1-like.	0.810
ENSSTUP00000064800	LOC115179270	ENSSTUP00000064800	ENSSTUP00000032459	annotation not available	Metabotropic glutamate receptor 1-like.	0.810
HOMER1-2	ENSSTUP00000013238	ENSSTUP00000093254	ENSSTUP00000013238	Homer scaffold protein 1.	annotation not available	0.967
HOMER1-2	ENSSTUP00000064800	ENSSTUP00000093254	ENSSTUP00000064800	Homer scaffold protein 1.	annotation not available	0.864
HOMER1-2	HOMER2	ENSSTUP00000093254	ENSSTUP00000012562	Homer scaffold protein 1.	Homer scaffold protein 2.	0.838
HOMER1-2	LOC115161988	ENSSTUP00000093254	ENSSTUP00000008929	Homer scaffold protein 1.	Metabotropic glutamate receptor 1-like.	0.864