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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115192209pre-mRNA-splicing factor 38A-like. (308 aa)    
Predicted Functional Partners:
ENSSTUP00000005397
Zinc finger, matrin-type 2.
   
 0.997
LOC115166918
Microfibrillar-associated protein 1-like.
   
 0.994
LOC115166918-2
Microfibrillar-associated protein 1-like.
   
 0.994
ik
IK cytokine.
   
 0.989
ENSSTUP00000004506
annotation not available
    
 0.983
UBL5
Ubiquitin-like protein 5.
    
 0.983
LOC115152709
Transcription elongation regulator 1-like protein.
   
 0.975
TCERG1
Transcription elongation regulator 1-like.
   
 0.975
ENSSTUP00000027557
annotation not available
   
 0.975
LOC115190190
Transcription elongation regulator 1-like protein.
   
 0.975
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.