STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115198130E3 ubiquitin-protein ligase TRIM62-like. (445 aa)    
Predicted Functional Partners:
LOC115158582
AP2-interacting clathrin-endocytosis protein-like.
  
     0.453
ENSSTUP00000023803
Adenylate kinase 9.
     
  0.453
ENSSTUP00000007693
annotation not available
    
  0.449
LOC115171446
Growth arrest-specific protein 7-like.
    
  0.449
LOC115201277
Growth arrest-specific protein 7-like.
    
  0.449
LOC115202767
Growth arrest-specific protein 7-like.
    
  0.449
LOC115169212
Uncharacterized LOC115169212.
  
 
   0.447
plekha4
Pleckstrin homology domain containing A4.
  
 
  0.447
LOC115156613
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2-like.
  
 
   0.438
LOC115168044
Protein SOGA1-like.
  
     0.434
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.