Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
ENSSTUP00000012669Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1. (342 aa)    
Predicted Functional Partners:
zranb2
Zinc finger RANBP2-type containing 2.
    
   0.868
LOC115179347
ELL-associated factor 1-like.
    
   0.754
EAF1
ELL-associated factor 1-like.
    
   0.754
LOC115159392
Putative RNA-binding protein Luc7-like 1.
    
   0.721
LUC7L
Putative RNA-binding protein Luc7-like 1.
    
   0.721
LOC115147316
Putative RNA-binding protein Luc7-like 2.
    
   0.721
ENSSTUP00000091189
Zgc:158803.
    
   0.721
LOC115171558
Histone chaperone asf1b-B.
    
 
 0.708
LOC115178156
Histone chaperone asf1b-B-like.
    
 
 0.708
ASF1B
Histone chaperone asf1b-B-like.
    
 
 0.708
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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