STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptdss2Phosphatidylserine synthase 2. (504 aa)    
Predicted Functional Partners:
LOC115168957
Choline/ethanolaminephosphotransferase 1-like.
     
 0.966
LOC115150283
Choline/ethanolaminephosphotransferase 1-like.
     
 0.966
LOC115166062
Choline/ethanolaminephosphotransferase 1-like.
     
 0.966
LOC115208147
Choline/ethanolaminephosphotransferase 1-like.
     
 0.966
ENSSTUP00000049623
Selenoprotein I.
     
 0.964
LOC115195091
Membrane-bound O-acyltransferase domain-containing protein 2-like.
     
 0.953
LOC115176530
Lysophospholipid acyltransferase 5-like.
     
 0.948
ENSSTUP00000105852
Lysophosphatidylcholine acyltransferase 3.
     
 0.948
LOC115198535
Lysophospholipid acyltransferase LPCAT4-like.
     
 0.947
ENSSTUP00000045948
Choline phosphotransferase 1.
     
 0.922
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.