Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115162473Protein CLN8-like. (289 aa)    
Predicted Functional Partners:
cln5
CLN5 intracellular trafficking protein.
      
 0.728
tpp1
Tripeptidyl peptidase 1.
    
 
 0.724
cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin.
      
 0.684
ENSSTUP00000056033
annotation not available
      
 0.684
ENSSTUP00000075961
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
      
 0.684
ENSSTUP00000101407
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
      
 0.684
LOC115199132
Leucine-rich repeat and guanylate kinase domain-containing protein-like.
    
 
 0.683
ENSSTUP00000113714
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.683
ccdc189
Coiled-coil domain containing 189.
    
 
 0.676
arsg
Arylsulfatase G.
      
 0.673
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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