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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115152963Protein S-acyltransferase 24-like. (553 aa)    
Predicted Functional Partners:
ENSSTUP00000049577
Huntingtin.
    
 
 0.598
ENSSTUP00000065453
annotation not available
    
 
 0.598
zdhhc6
Zinc finger DHHC-type containing 6.
      
0.497
LOC115162006
Vacuolar protein 8-like.
   
  
 0.485
LOC115180996
Syntaxin-17-like.
    
 
 0.455
LOC115181012
Syntaxin-17-like.
    
 
 0.455
LOC115182124
Syntaxin-12-like.
    
 
 0.413
LOC115174110
CCN family member 2-like.
    
 
 0.413
LOC115176957
Syntaxin-12-like.
    
 
 0.413
STX7
Syntaxin-7-like.
    
 
 0.413
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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