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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldh7a1Aldehyde dehydrogenase 7 family member A1. (547 aa)    
Predicted Functional Partners:
LOC115192728
Alpha-aminoadipic semialdehyde synthase, mitochondrial-like.
  
 
 0.983
chdh
Choline dehydrogenase.
  
 
 0.979
LOC115203928
Betaine--homocysteine S-methyltransferase 1.
  
 0.975
LOC115159735
Betaine--homocysteine S-methyltransferase 1-like.
  
 0.975
ENSSTUP00000035605
Alanine--glyoxylate aminotransferase 2.
  
 0.973
LOC115174637
5-phosphohydroxy-L-lysine phospho-lyase-like.
  
 0.971
ENSSTUP00000016287
Acetylserotonin O-methyltransferase-like.
  
 
 0.969
ACSF3
acyl-CoA synthetase family member 3.
  
 0.964
ehhadh
enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase.
  
 0.964
akr1a1
Aldo-keto reductase family 1 member A1.
  
 0.962
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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